Databases:
NCBI
Huge database containing genomic information of different organizsm and a variety of tools
http://www.ncbi.nlm.nih.gov/
ENSEMBL
Genome databases for vertebrates and other eukaryotic species
http://www.ensembl.org/index.html
Gene Ontology
Standardized representations of gene and gene products across different species
http://www.geneontology.org/
STRING Database
Known and Predicted Protein-Protein Interactions
http://string-db.org/
Bioprofiling
Web portal for analyses and interpretation of biological data of various natures
http://www.bioprofiling.de/
http://meme.nbcr.net/meme/
Motif-based sequence analysis tools
http://meme.nbcr.net/meme/
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