ORF               rep Sequence                       Description
A65_orf115 QGEQI: 81,88,102,109 - QGEQIKS: 102,109 A65_orf118 QGEQ: 44,58,72 - GEQIKA: 73,80,58,44 A65_orf306 (SAEL)15: 26-87 PrrB homolog protein, ECOLI A65_orf787o KDSSK: 469,558,673 putative lipoprotein, MG260 homolog, MYCGE A65_orf794 NQGKKVEG: 478,488,497 putative lipoprotein, MG260 homolog, MYCGE NNGKK: 222,498,478 C09_orf910 YPDDIPDVDA: 155,174 DnaJ homolog protein, MYCCA IPDVDA: 178,201,159 DVDAG: 141,180,203 C12_orf249 AEIE: 6,186,221 restriction-modification enzyme subunit S1B (hsdS); MYCPU C12_orf948L LSGGEAQRIRLA: 495,836 excinuclease ABC subunit A (uvrA); ECOLI TGLSGSGKSSL: 37,646 ADYLIDIGP: 562,904 LYVLDEPS: 517,859 VGLEYLNL: 481,822 D02_orf1036o LDWEALIGNS: 643,857 protein P200; MYCPN EIEPNFESE: 752,776 EPEPNFE: 738,776,751,718 EANAE: 684,818,613,638 ELPQE: 213,766,440 EPEV: 582,744,710 D09_orf554 SNAYL: 3,65,527 phosphomannomutase (cpsG); MYCPI D09_orf657 SSDD: 470,589,128 putative lipoprotein, MG040 homolog, MYCGE D12_orf257 QGEQIKVQGEQIKAQ: 163,191 - KVQGEQIKAQG: 168,189 QGEQIKVQG: 163,170 QGEQIK: 163,219 E07_orf133 RFDSMETRLD: 104,118 - E07_orf1627 SSGSG: 338,1315, KPGAPRPPV: adhesin P1 (orf5, P1 operon); MYCPN 1601,1612 E07_orf166 KVDKLE: 84,119,112,105,126,98,91 - E07_orf179 RLDSME: 158,165 - E07_orf228 DSIEGRLDSMDSRLDSMENRLD: 166,201 - RLDSIEG: 185,178 RLDSMEN; RLDSVEG; RLDSIEG all between 166-222 E07_orf540o APTPTPAP: 459,465 N-utilization substance protein A homolog (nusA); BACSU E07_orf794 QNQGKKGEGAQNQGK: 503,513 putative lipoprotein, MG260 homolog, MYCGE (QNQGKKGEGA)2 E09_orf204o PKPLKPPKPP: 65,71 protein P30, MYCPN F10_orf1818 LKNKEAEL: 556,1361 cytadherence accessory hmw2 protein; MYCPN AELNNKA: 107,561 QKQAEL: 625,957 F10_orf405 AYYGYGQDGQAYPQDYAQDPNQAYYADPNAYQD P65 protein; MYCPN PNAYTDP: 57,122 DPNAY; between 83-168 DPNQAYYPDPN: 40,75,140 F11_orf148o KAQGE: 86,114,121, - QGEQI: 102,116,88 F11_orf402 SAPQPTPAP: 141,155 dihydrolipoamide acetyltransferase component (E2) (pdhC); ACHLA TPTPAP: 103,144,158 F11_orf887 ALSAI: 466,564,89 MG277 homolog, MYCGE G12_orf168 RLDKMEVKMDKME: 119-147 - (KMDKME): between 123-159 GT9_orf760 QNQGKKGDGAQN: 714,724 putative lipoprotein, MG185 homolog, MYCGE (QNQGKKGDGAQ)2 H03_orf433 GNG:14,17,37,39,71,40 GTP-binding protein (obg); BACSU H08_orf1005 PVAEVQSEMVQPEAA: 294,382 putative lipoprotein, MG321 homolog, MYCGE VEPQPEQPVEVQPE: 401,440 EMVQPEVAVEP: 241,389 YEVQPEVAAEPV: 181,192 QPEVVVEPIVE: 219,392 QLEQPVEVQAE: 231,404 VQPEVAAEPV: 183,303 H08_orf1018 STGSSTGSST: 448,920 cytadherence-accessory protein (hmw1); MYCPN H08_orf274 GFPPQPGMAPRPGMPPHPGMAPRP: 30K adhesin-related protein; MYCPN 172,196,220,244 12 copies of 3 different repeats H08_orf672 DPNAYYDQQAY: 216,254 cytadherence accessory protein HMW3; MYCPN VEPTPTPVVE: 310,330 ATYDQQAYDQ: 204,219 AYDQTFDQ: 196,225 VESAPIVE: 298,318 H10_orf187V ELSAELSAEL: 149,157 HsdS1B protein homolog; MYCPU (SAEL)4 H91_orf180 KVDKLEIKVDKL: 84,98 - RLDSVEGRLDSM: 151,158 KVDKLE: 91,98,84 H91_orf330 (SAEL)16: 48-111 type I restriction enzyme ecokI specificity protein (hsdS) homolog; HAEIN P01_orf1033 LDQTQLLDELV: 192,227 MG328 homolog, MYCGE HELLQESYNK: 727,828 NQVNLEKQ: 882,934 QEQLA: 577,686,485 QXQLE: 321,374,935,823,314 P01_orf199 LICSPCFSTVWVSLLICSPW: 73,101 - (LICSP)6: 87,101,73,115,73,59, P02_orf196 (DKMEVKM)3: 163,170 (GEQINKLTQTVEKQ)2: 89,117 - (GEQIN)4: 88,102,116,131 R02_orf183o GEQINKLTQTVEKQGEQI: 89,106 - QGEQIX: 130,144,88,102,116 type I restriction enzyme ecokI specificity protein (hsdS) homolog; HAEIN R02_orf335 (SAEL)5: 107-126 putative lipoprotein, MG260 homolog, MYCGE R02_orf541 NQGKKAEGT: 493,501 VXpSPT7_orf237 TTKVAKETK: 187,195 ribosomal protein L23 (rpL23); THEMA KVAKEVK: 156,180 (KVAKE)4: 180,204,189,156,

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