Map3-2D
A freely available software to
accurately project multi-dimensional (3D-5D) fluorescence microscopy image data
onto 2D maps. Similar to the Earth's projection onto cartographic maps, Map3-2D
unfolds surface information from a stack of images onto a single, structurally interconnected
map. By cross-referencing between the 2D map and the original image stack,
precise quantitative analyses of intensities and shapes are easily and
intuitively executable.
Yeast (3D) |
➪ |
Yeast surface (2D Map) |
S. cerevisiae cell expressing Rtn1-GFP (green) and dsRedHDEL (red). 4 different viewing angles are shown (left).
Yeast cells kindly provided by Dr. Sebastian Schuck, ZMBH.
Download Map3-2DMap3-2D for PC (64-bit)Map3-2D for Mac |
Map3-2D Source CodeVersion 1.2 |
Map3-2D DocumentationVersion 1.0 |
Map3-2D TutorialTutorial version 1.0Test image folder "GUV.zip" |
2D map projections for visualization and quantitative analysis of 3D fluorescence micrographs
G. Hernán Sendra, Christian H. Hoerth, Christian Wunder and Holger Lorenz
Scientific Reports 5, 12457 (2015), doi:10.1038/srep12457