Doctoral Programme 'Molecular Cell Biology' (GK 230)
1. Programme and objectives
1.1 Summary
The doctoral programme GK 230 "Molecular and Cell Biology"
offers its research fellows a wide range of study and research
opportunities in the field of molecular and cellular biology.
It focuses on the analysis of molecular mechanisms and their
integration into the whole cell function. Investigating the complex
functions of the cell requires a multitude of techniques and
methods. In vitro systems are developed and employed to
identify and characterise the molecules which are involved in
these functions. Genetic modification of cells allows the analysis
of cellular functions in relation to both, the cell as a whole
and the organism.
Special topics are: protein synthesis, folding, transport
and degradation, as well as organelle biogenesis, cell polarity,
cell-to-cell interaction.
The doctoral programme GK 230 offers its research fellows
a carefully designed study programme. Topic-based seminars discuss
and elucidate various research questions of cell biology. Method
courses as well as external and internal academic advising are
also part of the curriculum.
The doctoral program is complemented by the international
"Molecular and Cellular Biology" (MCB) Master`s programme.
The doctoral programme GK 230 closely cooperates with the Sonderforschungsbereich
352, a DFG sponsored priority programme focussing on molecular
mechanisms of intracellular transport processes.
1.2 Research Programme
The research programme covers a wide range of molecular cell
biology topics:
Transport between the nucleus and the cytoplasm
Molecules constantly travel between the nucleus and the cytoplasm:
RNA and RNP molecules are exported from the nucleus to the cytoplasm,
on the one hand, and proteins are imported from the cytoplasm
to the nucleus, on the other hand. Combining genetic and biochemical
methods, Ed Hurt and Dirk
Görlich, with their respective working groups, have
dedicated themselves to exploring the molecular mechanisms responsible
for transport from the nucleus to the cytoplasm and vice versa.
They employ a multitude of methods: genetic and biochemical approaches,
microscopy and biophysics, as well as computer simulation.
Lamins form a complex network in the interior of the nucleus,
which is linked to the nuclear membrane and the chromatin. Harald Herrmann-Lerdon characterises
structure-defining elements of lamins by using microscopy and
biochemical methods.
mRNA transport and protein localisation
mRNA localisation allows proteins to be asymmetrically distributed
within the cell. The mechanisms at work in these transport processes
are investigated by Ralf-Peter Jansen
and Matthias Seedorf, who use
yeast as an experimental system. Protein stability and transport
to the nucleus are decisive factors in setting biological clocks.
Michael Brunner examines intracellular
transport regulation of FRQ frequency protein, a central regulator
of neurospora crassa`s biological clock.
Signal sequence-dependend protein localisation
Secreted and membrane proteins are inserted into the membrane
of the endoplasmaic reticulum (ER). This process involves signal
sequences, the signal recognition particle (SRP), the SRP receptor
and a translocation channel (translocon) in the ER membrane.
Irmgard Sinning and Bernhard Dobberstein characterise
structural and functional aspects of SRP-regulated translocation
of proteins in E. coli and animal cells.
Vesicular transport
Different aspects of vesicular transport are the main focus
of six research groups. The group of Felix
Wieland studies anterograde and retrograde trafficking
between ER and Golgi membranes, with special emphasis on the
molecular mechanisms of vesicle budding reactions. David
Robinson analyses Golgi vesicles that carry proteins,
either to lysosomes, or vacuoles in plamt cells. Marie
Isabel Geli investigates the role of the myosin-1 motor
in yeast endocytosis. A new test system was developed which allows
the identification of factors which interact with myosin-1.
The amyloid precursor protein (APP) is proteolytically processed
by various secretases during its intracellular transport. Gerhard Multhaup`s research objective
is to find out how copper ions affect the ß-secretase activity
and amyloid production.
Vesicular transport is regulated by different signals. Peter Mayinger examines the function
of phosphoinositides in the regulation of intracellular protein
transport and ATP transport into the ER lumen. Blanche
Schwappach studies how transport of ion channels to the
plasma membrane is regulated. She employs a random screen based
on retroviral gene transfer and flow cytometry. Walter
Nickel uses a similar approach to identify the molecular
mechanisms for unconventional secretion of particular growth
factors, i. e. fibroplast growth factor, migration inhibiting
factor.
The biosynthetic origin of peroxisomes is under intensive investigation.
After maturation, additional proteins are imported from the cytosol
to peroxisomal precursor organelles. Wilhelm
Just and his working group characterise stages in peroxisomal
biogenesis and the impact of the cytoskeleton peroxisomal mobility.
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